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  5. Sopen11g013320

Sopen11g013320


Description : Reverse transcriptase (RNA-dependent DNA polymerase)


Gene families : OG_42_0000008 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g013320
Cluster HCCA clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Cre03.g183950 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.01 Orthogroups_2024-Update
Solyc08g062410 No alias No description available 0.02 Orthogroups_2024-Update
Sopen01g003530 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen03g020190 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.04 Orthogroups_2024-Update
Sopen05g019250 No alias Integrase core domain 0.03 Orthogroups_2024-Update
Sopen06g011320 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013103 RVT_2 291 407
IPR025724 GAG-pre-integrase_dom 12 71
No external refs found!