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  5. A4A49_40794

A4A49_40794


Description : hypothetical protein


Gene families : OG_42_0000589 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000589_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_40794
Cluster HCCA clusters: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
A4A49_02685 No alias hypothetical protein 0.03 Orthogroups_2024-Update
At4g24430 No alias LG27/30-like gene [Source:UniProtKB/TrEMBL;Acc:Q9STV1] 0.04 Orthogroups_2024-Update
Bradi3g57440 No alias Rhamnogalacturonate lyase family protein 0.02 Orthogroups_2024-Update
Mp2g13570.1 No alias no hits & (original description: none) 0.03 Orthogroups_2024-Update
Mp7g11760.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
PSME_00024160-RA No alias (at1g09890 : 252.0) Rhamnogalacturonate lyase family... 0.02 Orthogroups_2024-Update
Potri.002G110000 No alias Rhamnogalacturonate lyase family protein 0.05 Orthogroups_2024-Update
Potri.002G110300 No alias Rhamnogalacturonate lyase family protein 0.04 Orthogroups_2024-Update
Potri.006G218500 No alias Rhamnogalacturonate lyase family protein 0.03 Orthogroups_2024-Update
Pp1s117_149V6 No alias lg27 30-like gene 0.02 Orthogroups_2024-Update
Solyc11g011310 No alias Rhamnogalacturonate lyase family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen04g006570 No alias Rhamnogalacturonate lyase family 0.03 Orthogroups_2024-Update
Sopen11g006070 No alias Rhamnogalacturonate lyase family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR029411 RG-lyase_III 444 632
IPR010325 Rhamnogal_lyase 4 204
IPR029413 RG-lyase_II 358 429
No external refs found!