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  5. A4A49_40832

A4A49_40832


Description : atp-dependent dna helicase ddm1


Gene families : OG_42_0000148 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000148_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_40832
Cluster HCCA clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Pp1s223_99V6 No alias chromodomain helicase dna binding protein 5 0.03 Orthogroups_2024-Update
Seita.2G023300.1 No alias chromatin remodeling factor *(DDM1) 0.05 Orthogroups_2024-Update
Sobic.001G109700.1 No alias chromatin remodeling factor *(DDM1) 0.03 Orthogroups_2024-Update
Solyc01g090640 No alias Chromodomain helicase-DNA-binding-like protein (AHRD... 0.05 Orthogroups_2024-Update
Solyc02g062780 No alias chromatin remodeling 1 (AHRD V3.3 *** AT5G66750.1) 0.04 Orthogroups_2024-Update
Sopen06g019630 No alias SNF2 family N-terminal domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000330 SNF2_N 203 491
IPR001650 Helicase_C 515 627
No external refs found!