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  5. A4A49_41017

A4A49_41017


Description : hypothetical protein


Gene families : OG_42_0000101 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_41017
Cluster HCCA clusters: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
Brara.J00566.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J00655.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G044020.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G103160.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os10g11250 No alias transposon protein, putative, CACTA, En/Spm sub-class, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g11870 No alias transposon protein, putative, CACTA, En/Spm sub-class, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g21980 No alias transposon protein, putative, CACTA, En/Spm sub-class, expressed 0.02 Orthogroups_2024-Update
Sopen05g023540 No alias Transposase family tnp2 0.03 Orthogroups_2024-Update
Sopen10g011990 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen11g015220 No alias Transposase family tnp2 0.03 Orthogroups_2024-Update
Sopen11g021540 No alias Domain of unknown function (DUF4218) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004242 Transposase_21 11 95
IPR025452 DUF4218 344 407
IPR025312 DUF4216 511 587
No external refs found!