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  5. Sopen11g014800

Sopen11g014800


Description : Reverse transcriptase (RNA-dependent DNA polymerase)


Gene families : OG_42_0000008 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g014800
Cluster HCCA clusters: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Brara.C01241.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g32470 No alias retrotransposon protein, putative, unclassified 0.02 Orthogroups_2024-Update
LOC_Os01g37610 No alias retrotransposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g71840 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g41690 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Solyc01g067050 No alias No description available 0.03 Orthogroups_2024-Update
Solyc05g041460 No alias No description available 0.03 Orthogroups_2024-Update
Solyc05g053320 No alias LOW QUALITY:Retrovirus-related Pol polyprotein from... 0.03 Orthogroups_2024-Update
Sopen01g016050 No alias gag-polypeptide of LTR copia-type 0.03 Orthogroups_2024-Update
Sopen01g025970 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen02g015640 No alias gag-polypeptide of LTR copia-type 0.03 Orthogroups_2024-Update
Sopen03g028500 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen04g006060 No alias gag-polypeptide of LTR copia-type 0.03 Orthogroups_2024-Update
Sopen05g010950 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen06g011320 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen06g024630 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen07g005860 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen10g024360 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013103 RVT_2 79 170
No external refs found!