A4A49_50672

Description : protein far1-related sequence 6

Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_50672
Cluster	HCCA clusters: Cluster_120(default)

Target	Alias	Description	ECC score	Gene Family Method
GRMZM2G114461	No alias	FAR1-related sequence 5	0.03	Orthogroups_2024-Update
Glyma.02G273500	No alias	FAR1-related sequence 3	0.02	Orthogroups_2024-Update
Glyma.09G039300	No alias	FAR1-related sequence 11	0.03	Orthogroups_2024-Update
Potri.009G158400	No alias	FAR1-related sequence 3	0.03	Orthogroups_2024-Update
Solyc07g045520	No alias	FAR1-related sequence 10 (AHRD V3.3 *** AT5G28530.3)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004330	FAR1_DNA_bnd_dom	126	209
IPR004330	FAR1_DNA_bnd_dom	725	806
IPR018289	MULE_transposase_dom	329	415
IPR018289	MULE_transposase_dom	929	1023
IPR007527	Znf_SWIM	1215	1247
IPR007527	Znf_SWIM	542	566

External Links

No external refs found!