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  5. Solyc02g092450

Solyc02g092450


Description : Calcium-transporting ATPase (AHRD V3.3 *** M1BXI4_SOLTU)


Gene families : OG_42_0000196 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g092450
Cluster HCCA clusters: Cluster_265

Target Alias Description ECC score Gene Family Method Actions
At3g21180 No alias Calcium-transporting ATPase... 0.03 Orthogroups_2024-Update
At4g29900 No alias Calcium-transporting ATPase 10, plasma membrane-type... 0.03 Orthogroups_2024-Update
Bradi2g21180 No alias autoinhibited Ca(2+)-ATPase, isoform 4 0.02 Orthogroups_2024-Update
GRMZM2G006977 No alias calcium ATPase 2 0.04 Orthogroups_2024-Update
HORVU2Hr1G101040.25 No alias P2B-type calcium cation-transporting ATPase *(ACA) 0.03 Orthogroups_2024-Update
MA_10034665g0010 No alias "(at5g57110 : 291.0) Arabidopsis-autoinhibited Ca2+... 0.03 Orthogroups_2024-Update
MA_103067g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Mp6g04030.1 No alias P2B-type calcium cation-transporting ATPase (ACA) 0.02 Orthogroups_2024-Update
Sopen00g007940 No alias E1-E2 ATPase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan predictions
MF GO:0005516 calmodulin binding IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
InterPro domains Description Start Stop
IPR024750 Ca_ATPase_N_dom 5 50
IPR004014 ATPase_P-typ_cation-transptr_N 117 186
IPR006068 ATPase_P-typ_cation-transptr_C 841 1013
IPR008250 ATPase_P-typ_transduc_dom_A_sf 206 445
No external refs found!