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  5. Solyc02g092550

Solyc02g092550


Description : LOB domain-containing protein, putative (AHRD V3.3 *** B9SGY6_RICCO)


Gene families : OG_42_0000544 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000544_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g092550
Cluster HCCA clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Glyma.01G192600 No alias LOB domain-containing protein 38 0.05 Orthogroups_2024-Update
HORVU4Hr1G013380.2 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
MA_122595g0010 No alias (at3g49940 : 211.0) LOB domain-containing protein 38... 0.03 Orthogroups_2024-Update
PSME_00006100-RA No alias (at5g67420 : 192.0) LOB domain-containing protein 37... 0.03 Orthogroups_2024-Update
PSME_00021971-RA No alias (at1g67100 : 181.0) LOB domain-containing protein 40... 0.02 Orthogroups_2024-Update
Sobic.001G169200.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Sopen02g037120 No alias Protein of unknown function DUF260 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 2 101
No external refs found!