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  5. A4A49_58689

A4A49_58689


Description : heterogeneous nuclear ribonucleoprotein 1


Gene families : OG_42_0000197 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000197_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_58689
Cluster HCCA clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
Glyma.19G061100 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
MA_473g0010 No alias (at5g40490 : 214.0) RNA-binding (RRM/RBD/RNP motifs)... 0.04 Orthogroups_2024-Update
MA_68291g0010 No alias (at3g13224 : 261.0) RNA-binding (RRM/RBD/RNP motifs)... 0.03 Orthogroups_2024-Update
MpVg00970.1 No alias No annotation 0.02 Orthogroups_2024-Update
PSME_00053276-RA No alias (at3g07810 : 272.0) RNA-binding (RRM/RBD/RNP motifs)... 0.03 Orthogroups_2024-Update
Potri.001G370300 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
Solyc10g006050 No alias RNA-binding protein, putative (AHRD V3.3 *** Q1ENZ5_MUSAC) 0.03 Orthogroups_2024-Update
Sopen07g023790 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 17 74
IPR000504 RRM_dom 105 166
No external refs found!