Sopen11g018420


Description : Reverse transcriptase (RNA-dependent DNA polymerase)


Gene families : OG_42_0000004 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g018420
Cluster HCCA clusters: Cluster_346

Target Alias Description ECC score Gene Family Method Actions
LOC_Os11g34050 No alias retrotransposon, putative, centromere-specific, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 111 207
IPR001584 Integrase_cat-core 1190 1301
IPR000477 RT_dom 1602 1817
IPR000477 RT_dom 648 807
No external refs found!