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  5. Sopen11g019280

Sopen11g019280


Description : Retroviral aspartyl protease


Gene families : OG_42_0001421 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001421_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g019280
Cluster HCCA clusters: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Solyc04g017990 No alias No description available 0.03 Orthogroups_2024-Update
Sopen07g018680 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen10g014370 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.06 Orthogroups_2024-Update
Sopen12g022280 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000477 RT_dom 731 801
IPR005162 Retrotrans_gag_dom 206 302
No external refs found!