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  5. A4A49_63038

A4A49_63038


Description : agamous-like mads-box protein agl19


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_63038
Cluster HCCA clusters: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
A4A49_14436 No alias agamous-like mads-box protein agl11 0.03 Orthogroups_2024-Update
A4A49_14828 No alias agamous-like mads-box protein agl104 0.03 Orthogroups_2024-Update
At4g11880 No alias Agamous-like MADS-box protein AGL14... 0.03 Orthogroups_2024-Update
At5g15800 No alias K-box region and MADS-box transcription factor family... 0.03 Orthogroups_2024-Update
Bradi2g57000 No alias K-box region and MADS-box transcription factor family protein 0.01 Orthogroups_2024-Update
Brara.B03740.1 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.02 Orthogroups_2024-Update
Brara.C01460.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Brara.G01817.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Brara.K01743.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G160687 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
GRMZM5G878490 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
Glyma.05G050700 No alias AGAMOUS-like 19 0.03 Orthogroups_2024-Update
Glyma.08G282500 No alias AGAMOUS-like 29 0.03 Orthogroups_2024-Update
Glyma.09G266200 No alias AGAMOUS-like 20 0.03 Orthogroups_2024-Update
Glyma.18G273600 No alias AGAMOUS-like 8 0.03 Orthogroups_2024-Update
HORVU1Hr1G063620.2 No alias component *(PISTILLATA) of AP3-PISTILLATA organ-identity... 0.03 Orthogroups_2024-Update
HORVU3Hr1G026650.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
HORVU3Hr1G095240.6 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os01g69850 No alias OsMADS65 - MADS-box family gene with MIKC* type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g06860 No alias OsMADS80 - MADS-box family gene with M-alpha type-box, expressed 0.02 Orthogroups_2024-Update
Solyc01g092950 No alias MADS-box transcription factor (AHRD V3.3 *** A0A072TQ92_MEDTR) 0.03 Orthogroups_2024-Update
Solyc01g105800 No alias MADS box transcription factor (AHRD V1 **--... 0.02 Orthogroups_2024-Update
Solyc03g006830 No alias MADS-box transcription factor FYFL (AHRD V3.3 *** W5S185_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
IPR002487 TF_Kbox 87 173
No external refs found!