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  5. Sopen11g020410

Sopen11g020410


Description : Glycosyl hydrolase family 3 N terminal domain


Gene families : OG_42_0000397 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000397_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g020410
Cluster HCCA clusters: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
A4A49_17457 No alias beta-d-xylosidase 1 0.05 Orthogroups_2024-Update
At1g02640 No alias Probable beta-D-xylosidase 2... 0.03 Orthogroups_2024-Update
At5g49360 No alias Beta-D-xylosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGY1] 0.03 Orthogroups_2024-Update
At5g64570 No alias Beta-D-xylosidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLG1] 0.03 Orthogroups_2024-Update
Brara.F02333.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 Orthogroups_2024-Update
Brara.F02936.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.06 Orthogroups_2024-Update
Glyma.06G105300 No alias Glycosyl hydrolase family protein 0.04 Orthogroups_2024-Update
HORVU4Hr1G003910.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.05 Orthogroups_2024-Update
HORVU4Hr1G069100.2 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Orthogroups_2024-Update
PSME_00032922-RA No alias (at5g10560 : 854.0) Glycosyl hydrolase family protein;... 0.02 Orthogroups_2024-Update
Pp1s196_21V6 No alias periplasmic beta-glucosidase 0.03 Orthogroups_2024-Update
Seita.8G106400.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002772 Glyco_hydro_3_C 392 622
IPR026891 Fn3-like 690 755
IPR001764 Glyco_hydro_3_N 106 351
No external refs found!