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  5. Sopen11g020680

Sopen11g020680


Description : PPR repeat family


Gene families : OG_42_0001573 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001573_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g020680
Cluster HCCA clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
407940 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
At1g62350 No alias Pentatricopeptide repeat (PPR) superfamily protein... 0.02 Orthogroups_2024-Update
Glyma.12G058700 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G269900 No alias Vacuolar sorting protein 9 (VPS9) domain 0.03 Orthogroups_2024-Update
HORVU0Hr1G003320.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G345800.1 No alias plastidial RNA splicing factor *(THA8) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 110 157
No external refs found!