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  5. A4A49_63668

A4A49_63668


Description : cyclic nucleotide-gated ion channel 1


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_63668
Cluster HCCA clusters: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Bradi1g46260 No alias cyclic nucleotide-binding transporter 1 0.01 Orthogroups_2024-Update
Glyma.09G168400 No alias cyclic nucleotide-binding transporter 1 0.02 Orthogroups_2024-Update
Glyma.12G152300 No alias cyclic nucleotide gated channel 5 0.03 Orthogroups_2024-Update
Glyma.16G025400 No alias cyclic nucleotide-gated channel 13 0.01 Orthogroups_2024-Update
LOC_Os06g10580 No alias cyclic nucleotide-gated ion channel, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g38580 No alias cyclic nucleotide-gated ion channel, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00010744-RA No alias (at3g17700 : 191.0) cyclic nucleotide-binding... 0.03 Orthogroups_2024-Update
PSME_00046136-RA No alias (at1g15990 : 435.0) member of Cyclic nucleotide gated... 0.03 Orthogroups_2024-Update
Potri.012G038700 No alias cyclic nucleotide-binding transporter 1 0.03 Orthogroups_2024-Update
Potri.015G019100 No alias cyclic nucleotide gated channel 1 0.03 Orthogroups_2024-Update
Seita.1G014200.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Seita.4G044900.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Sobic.006G237400.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 89 404
IPR000595 cNMP-bd_dom 499 589
No external refs found!