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  5. A4A49_64410

A4A49_64410


Description : 50s ribosomal protein l24, chloroplastic


Gene families : OG_42_0005677 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005677_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_64410
Cluster HCCA clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
230291 No alias Translation protein SH3-like family protein 0.02 Orthogroups_2024-Update
Bradi1g33030 No alias Translation protein SH3-like family protein 0.06 Orthogroups_2024-Update
Brara.B01369.1 No alias component *(uL24c) of large plastid ribosomal-subunit proteome 0.05 Orthogroups_2024-Update
Brara.J00929.1 No alias component *(uL24c) of large plastid ribosomal-subunit proteome 0.06 Orthogroups_2024-Update
Cre16.g652550 No alias Translation protein SH3-like family protein 0.12 Orthogroups_2024-Update
Glyma.12G215900 No alias Translation protein SH3-like family protein 0.06 Orthogroups_2024-Update
Glyma.13G285600 No alias Translation protein SH3-like family protein 0.11 Orthogroups_2024-Update
HORVU7Hr1G101810.1 No alias component *(uL24c) of large plastid ribosomal-subunit proteome 0.08 Orthogroups_2024-Update
Kfl00086_0080 kfl00086_0080_v1.1 (at5g54600 : 178.0) Translation protein SH3-like family... 0.03 Orthogroups_2024-Update
Potri.001G415400 No alias Translation protein SH3-like family protein 0.11 Orthogroups_2024-Update
Pp1s24_126V6 No alias ribosomal protein l24 0.1 Orthogroups_2024-Update
Seita.4G255700.1 No alias component *(uL24c) of large plastid ribosomal-subunit proteome 0.05 Orthogroups_2024-Update
Sobic.010G233800.1 No alias component *(uL24c) of large plastid ribosomal-subunit proteome 0.09 Orthogroups_2024-Update
Solyc07g063960 No alias 50S ribosomal protein L24, chloroplastic (AHRD V3.3 ***... 0.08 Orthogroups_2024-Update
Sopen07g032100 No alias KOW motif 0.11 Orthogroups_2024-Update
evm.model.tig00000455.16 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003256 Ribosomal_L24 98 162
IPR005824 KOW 66 96
No external refs found!