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  5. Potri.001G043900

Potri.001G043900


Description : cyclic nucleotide gated channel 8


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.001G043900
Cluster HCCA clusters: cluster_0179

Target Alias Description ECC score Gene Family Method Actions
A4A49_26569 No alias putative cyclic nucleotide-gated ion channel 16 0.03 Orthogroups_2024-Update
GRMZM2G141642 No alias cyclic nucleotide-binding transporter 1 0.03 Orthogroups_2024-Update
Glyma.13G141000 No alias cyclic nucleotide-gated channel 15 0.04 Orthogroups_2024-Update
Potri.003G183000 No alias cyclic nucleotide gated channel 8 0.03 Orthogroups_2024-Update
Solyc11g069580 No alias Cyclic nucleotide-gated channel (AHRD V3.3 *** A0A0K9PRG4_ZOSMR) 0.04 Orthogroups_2024-Update
Sopen11g028290 No alias Ion transport protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 108 435
IPR000595 cNMP-bd_dom 529 618
No external refs found!