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  5. Potri.001G052300

Potri.001G052300


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.001G052300
Cluster HCCA clusters: cluster_0116

Target Alias Description ECC score Gene Family Method Actions
407495 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
A4A49_16129 No alias putative pectate lyase 18 0.04 Orthogroups_2024-Update
A4A49_26358 No alias putative pectate lyase p18 0.03 Orthogroups_2024-Update
A4A49_40134 No alias putative pectate lyase p59 0.03 Orthogroups_2024-Update
At4g24780 No alias Probable pectate lyase 18... 0.04 Orthogroups_2024-Update
At5g09280 No alias Pectate lyase [Source:UniProtKB/TrEMBL;Acc:Q9FY87] 0.03 Orthogroups_2024-Update
At5g63180 No alias Probable pectate lyase 22... 0.02 Orthogroups_2024-Update
Brara.G02558.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.07 Orthogroups_2024-Update
Brara.I00410.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.05 Orthogroups_2024-Update
Brara.K01484.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.05 Orthogroups_2024-Update
Glyma.10G125000 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G277200 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G244800 No alias Pectate lyase family protein 0.03 Orthogroups_2024-Update
Glyma.18G255900 No alias Pectate lyase family protein 0.04 Orthogroups_2024-Update
Glyma.20G112600 No alias Pectin lyase-like superfamily protein 0.07 Orthogroups_2024-Update
LOC_Os06g05260 No alias pectate lyase precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_101171g0010 No alias (at1g67750 : 487.0) Pectate lyase family protein;... 0.02 Orthogroups_2024-Update
MA_10205415g0010 No alias (at5g63180 : 429.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
MA_10426822g0020 No alias (at1g67750 : 481.0) Pectate lyase family protein;... 0.03 Orthogroups_2024-Update
MA_10430145g0030 No alias (at4g13210 : 482.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
MA_10433252g0010 No alias (at3g24670 : 194.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
MA_203992g0010 No alias (at4g24780 : 544.0) Pectin lyase-like superfamily... 0.06 Orthogroups_2024-Update
MA_91467g0020 No alias (at4g24780 : 289.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
MA_97947g0010 No alias (at1g67750 : 510.0) Pectate lyase family protein;... 0.03 Orthogroups_2024-Update
PSME_00017512-RA No alias (at4g24780 : 545.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00019559-RA No alias (at4g13710 : 600.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00020782-RA No alias (at5g63180 : 492.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00029400-RA No alias (at5g63180 : 504.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00041064-RA No alias (at1g67750 : 595.0) Pectate lyase family protein;... 0.02 Orthogroups_2024-Update
PSME_00043773-RA No alias (at1g67750 : 590.0) Pectate lyase family protein;... 0.02 Orthogroups_2024-Update
Potri.012G091500 No alias Pectin lyase-like superfamily protein 0.05 Orthogroups_2024-Update
Potri.014G178100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s173_162V6 No alias pectate lyase 0.03 Orthogroups_2024-Update
Pp1s28_242V6 No alias pectate lyase 0.02 Orthogroups_2024-Update
Pp1s67_160V6 No alias pectate lyase 0.03 Orthogroups_2024-Update
Pp1s84_82V6 No alias pectate lyase 0.03 Orthogroups_2024-Update
Sobic.004G091000.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Sobic.006G014400.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Sobic.010G034200.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Solyc03g071570 No alias Pectate lyase (AHRD V3.3 *** K4BHI7_SOLLC) 0.04 Orthogroups_2024-Update
Solyc03g111690 No alias Pectate lyase family protein (AHRD V3.3 *** AT1G67750.1) 0.06 Orthogroups_2024-Update
Sopen03g019850 No alias Pectate lyase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002022 Pec_lyase 183 365
No external refs found!