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  5. Potri.001G055900

Potri.001G055900


Description : squamosa promoter binding protein-like 2


Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Populus release: Potri.001G055900
Cluster HCCA clusters: cluster_0179

Target Alias Description ECC score Gene Family Method Actions
A4A49_27953 No alias squamosa promoter-binding-like protein 3 0.03 Orthogroups_2024-Update
At5g43270 No alias Squamosa promoter-binding-like protein 2... 0.03 Orthogroups_2024-Update
At5g50570 No alias Squamosa promoter-binding-like protein 13B... 0.04 Orthogroups_2024-Update
Brara.A03153.1 No alias SBP-type transcription factor 0.04 Orthogroups_2024-Update
Brara.F00135.1 No alias SBP-type transcription factor 0.04 Orthogroups_2024-Update
Brara.F03810.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Brara.H02059.1 No alias SBP-type transcription factor 0.04 Orthogroups_2024-Update
Cre07.g335150 No alias squamosa promoter binding protein-like 4 0.02 Orthogroups_2024-Update
Cre07.g345050 No alias squamosa promoter binding protein-like 10 0.01 Orthogroups_2024-Update
GRMZM2G101511 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
Glyma.17G080700 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
HORVU0Hr1G020810.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G076380.9 No alias SBP-type transcription factor 0.04 Orthogroups_2024-Update
MA_47367g0010 No alias (at1g02065 : 173.0) Encodes an SBP-box gene, a member of... 0.03 Orthogroups_2024-Update
Potri.004G046700 No alias squamosa promoter binding protein-like 3 0.03 Orthogroups_2024-Update
Potri.008G097900 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
Solyc02g077920 No alias Colorless non-ripening 0.03 Orthogroups_2024-Update
Sopen03g033930 No alias SBP domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004333 SBP_dom 181 255
No external refs found!