1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.001G074700

Potri.001G074700


Description : DNA glycosylase superfamily protein


Gene families : OG_42_0000660 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000660_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.001G074700
Cluster HCCA clusters: cluster_0025

Target Alias Description ECC score Gene Family Method Actions
98461 No alias DNA glycosylase superfamily protein 0.03 Orthogroups_2024-Update
A4A49_14405 No alias hypothetical protein 0.04 Orthogroups_2024-Update
A4A49_21045 No alias hypothetical protein 0.04 Orthogroups_2024-Update
At1g80850 No alias At1g80850 [Source:UniProtKB/TrEMBL;Acc:Q9SAH6] 0.03 Orthogroups_2024-Update
Bradi4g30437 No alias DNA glycosylase superfamily protein 0.03 Orthogroups_2024-Update
Brara.I04901.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU5Hr1G065200.16 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G113650.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g58550 No alias methyladenine glycosylase, putative, expressed 0.05 Orthogroups_2024-Update
MA_319186g0010 No alias (at1g13635 : 172.0) DNA glycosylase superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00048088-RA No alias (at5g57970 : 202.0) DNA glycosylase superfamily protein;... 0.03 Orthogroups_2024-Update
Potri.003G182300 No alias DNA glycosylase superfamily protein 0.03 Orthogroups_2024-Update
Seita.2G207200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.6G191700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G288800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc10g005210 No alias DNA-3-methyladenine glycosylase, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc12g010050 No alias DNA-3-methyladenine glycosylase, putative (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Sopen12g004930 No alias Methyladenine glycosylase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006284 base-excision repair IEA InterProScan predictions
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005019 Adenine_glyco 220 391
No external refs found!