1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.001G079600

Potri.001G079600


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.001G079600
Cluster HCCA clusters: cluster_0079

Target Alias Description ECC score Gene Family Method Actions
A4A49_16759 No alias ethylene-responsive transcription factor erf012 0.03 Orthogroups_2024-Update
Cre14.g620500 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G258200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G179900 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G041500 No alias ethylene-responsive element binding protein 0.02 Orthogroups_2024-Update
Glyma.14G205600 No alias cytokinin response factor 4 0.02 Orthogroups_2024-Update
LOC_Os09g26420 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
Mp5g12480.1 No alias Ethylene-responsive transcription factor ERF073... 0.02 Orthogroups_2024-Update
Pp1s79_25V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.2G112200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G060700.1 No alias subgroup ERF-II-DEAR transcription factor 0.02 Orthogroups_2024-Update
Seita.5G115000.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.01 Orthogroups_2024-Update
Solyc03g006320 No alias Ethylene-responsive transcription factor, putative (AHRD... 0.02 Orthogroups_2024-Update
Solyc08g078180 No alias Ethylene Response Factor A.1 0.03 Orthogroups_2024-Update
Solyc12g005960 No alias Ethylene-responsive transcription factor, putative (AHRD... 0.02 Orthogroups_2024-Update
Sopen10g008890 No alias AP2 domain 0.02 Orthogroups_2024-Update
evm.model.tig00000093.224 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 110 160
No external refs found!