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Description : Ubiquitin-conjugating enzyme (AHRD V3.3 *** B3TLZ3_ELAGV)
Gene families : OG_42_0001688 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001688_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc02g093110 | |
| Cluster | HCCA clusters: Cluster_46 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Brara.G01759.1 | No alias | E2 SUMO ubiquitin-conjugating enzyme *(SCE1) | 0.03 | Orthogroups_2024-Update | |
| LOC_Os10g39120 | No alias | ubiquitin-conjugating enzyme, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| Sobic.006G189200.1 | No alias | E2 SUMO ubiquitin-conjugating enzyme *(SCE1) | 0.01 | Orthogroups_2024-Update | |
| Sopen02g037680 | No alias | Ubiquitin-conjugating enzyme | 0.1 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
| MF | GO:0003855 | 3-dehydroquinate dehydratase activity | IEP | Predicted GO |
| MF | GO:0004559 | alpha-mannosidase activity | IEP | Predicted GO |
| MF | GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity | IEP | Predicted GO |
| MF | GO:0004871 | obsolete signal transducer activity | IEP | Predicted GO |
| CC | GO:0005730 | nucleolus | IEP | Predicted GO |
| CC | GO:0005795 | Golgi stack | IEP | Predicted GO |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Predicted GO |
| BP | GO:0006013 | mannose metabolic process | IEP | Predicted GO |
| BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
| BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
| MF | GO:0008455 | alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity | IEP | Predicted GO |
| MF | GO:0015923 | mannosidase activity | IEP | Predicted GO |
| BP | GO:0016071 | mRNA metabolic process | IEP | Predicted GO |
| MF | GO:0016151 | nickel cation binding | IEP | Predicted GO |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
| BP | GO:0019318 | hexose metabolic process | IEP | Predicted GO |
| BP | GO:0019627 | urea metabolic process | IEP | Predicted GO |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Predicted GO |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
| BP | GO:0030259 | lipid glycosylation | IEP | Predicted GO |
| MF | GO:0031683 | G-protein beta/gamma-subunit complex binding | IEP | Predicted GO |
| CC | GO:0031984 | organelle subcompartment | IEP | Predicted GO |
| BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
| BP | GO:0043419 | urea catabolic process | IEP | Predicted GO |
| BP | GO:0043605 | cellular amide catabolic process | IEP | Predicted GO |
| BP | GO:0070085 | glycosylation | IEP | Predicted GO |
| BP | GO:0071941 | nitrogen cycle metabolic process | IEP | Predicted GO |
| CC | GO:0098791 | Golgi subcompartment | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000608 | UBQ-conjugat_E2 | 9 | 150 |
| No external refs found! |