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  5. Potri.001G112400

Potri.001G112400


Description : AGAMOUS-like 19


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.001G112400
Cluster HCCA clusters: cluster_0031

Target Alias Description ECC score Gene Family Method Actions
121275 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
A4A49_09228 No alias mads-box protein jointless 0.04 Orthogroups_2024-Update
A4A49_10096 No alias mads-box protein soc1 0.05 Orthogroups_2024-Update
A4A49_14436 No alias agamous-like mads-box protein agl11 0.04 Orthogroups_2024-Update
A4A49_16645 No alias agamous-like mads-box protein agl11 0.03 Orthogroups_2024-Update
A4A49_20590 No alias mads-box transcription factor 27 0.03 Orthogroups_2024-Update
A4A49_20769 No alias agamous-like mads-box protein agl15 0.03 Orthogroups_2024-Update
A4A49_22632 No alias floral homeotic protein agamous 0.02 Orthogroups_2024-Update
A4A49_27621 No alias agamous-like mads-box protein agl9 0.02 Orthogroups_2024-Update
At1g01530 No alias AGL28 [Source:UniProtKB/TrEMBL;Acc:A0A178WE04] 0.03 Orthogroups_2024-Update
At1g26310 No alias Transcription factor CAULIFLOWER... 0.05 Orthogroups_2024-Update
At1g77980 No alias Agamous-like MADS-box protein AGL66... 0.02 Orthogroups_2024-Update
At2g03710 No alias Agamous-like MADS-box protein AGL3... 0.04 Orthogroups_2024-Update
At3g66656 No alias AGAMOUS-like 91 [Source:UniProtKB/TrEMBL;Acc:Q9C836] 0.03 Orthogroups_2024-Update
Bradi1g08340 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Bradi2g24940 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Bradi2g57000 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Bradi2g59191 No alias AGAMOUS-like 19 0.03 Orthogroups_2024-Update
Brara.C00582.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.C01461.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.C04259.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E00519.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.F03360.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.03 Orthogroups_2024-Update
Brara.I02486.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G099577 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
Glyma.01G064100 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.05G227300 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
Glyma.07G080900 No alias AGAMOUS-like 20 0.03 Orthogroups_2024-Update
Glyma.07G081300 No alias AGAMOUS-like 6 0.04 Orthogroups_2024-Update
Glyma.08G282500 No alias AGAMOUS-like 29 0.04 Orthogroups_2024-Update
Glyma.10G240500 No alias AGAMOUS-like 42 0.02 Orthogroups_2024-Update
Glyma.13G052700 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G029220.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G110470.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G081070.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
MA_333471g0010 No alias (at2g45660 : 106.0) Controls flowering and is required... 0.04 Orthogroups_2024-Update
MA_458668g0010 No alias (at2g45660 : 100.0) Controls flowering and is required... 0.04 Orthogroups_2024-Update
PSME_00042999-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.001G328600 No alias AGAMOUS-like 8 0.03 Orthogroups_2024-Update
Potri.004G064300 No alias K-box region and MADS-box transcription factor family protein 0.04 Orthogroups_2024-Update
Potri.015G134800 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Pp1s8_101V6 No alias mikc* mads-box transcription factor 0.02 Orthogroups_2024-Update
Seita.1G273400.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.03 Orthogroups_2024-Update
Seita.4G093200.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Seita.6G223700.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Sopen03g033910 No alias K-box region 0.04 Orthogroups_2024-Update
Sopen06g026710 No alias K-box region 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 175 222
IPR002487 TF_Kbox 249 336
No external refs found!