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  5. Potri.001G123400

Potri.001G123400


Description : chromatin remodeling 4


Gene families : OG_42_0000148 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000148_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Populus release: Potri.001G123400
Cluster HCCA clusters: cluster_0137

Target Alias Description ECC score Gene Family Method Actions
Bradi2g36380 No alias Homeotic gene regulator 0.03 Orthogroups_2024-Update
Brara.C01994.1 No alias SMARCA component *(SYD/BRM/MINU) 0.03 Orthogroups_2024-Update
Glyma.13G215900 No alias chromatin-remodeling protein 11 0.03 Orthogroups_2024-Update
Glyma.15G097000 No alias chromatin remodeling factor17 0.03 Orthogroups_2024-Update
Kfl00030_0270 kfl00030_0270_v1.1 (at5g66750 : 640.0) Protein is similar to SWI2/SNF2... 0.02 Orthogroups_2024-Update
LOC_Os01g27040 No alias chromatin-remodeling complex ATPase chain, putative, expressed 0.02 Orthogroups_2024-Update
MA_10429361g0010 No alias (at2g13370 : 1371.0) chromatin remodeling 5 (CHR5);... 0.03 Orthogroups_2024-Update
Pp1s166_101V6 No alias chromodomain helicase dna binding protein 6 0.02 Orthogroups_2024-Update
Seita.2G320900.1 No alias CHD3-type chromatin remodeling factor *(PKL/PKR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 75 118
IPR001650 Helicase_C 1071 1181
IPR009463 DUF1087 1364 1405
IPR023780 Chromo_domain 658 708
IPR023780 Chromo_domain 601 642
IPR000330 SNF2_N 766 1044
No external refs found!