1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.001G159300

Potri.001G159300


Description : RING/U-box superfamily protein


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.001G159300
Cluster HCCA clusters: cluster_0035

Target Alias Description ECC score Gene Family Method Actions
A4A49_59878 No alias ring-h2 finger protein atl60 0.03 Orthogroups_2024-Update
Bradi5g09830 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G031280 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G263000 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G060400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G060500 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
HORVU0Hr1G016510.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU3Hr1G028280.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
LOC_Os02g08200 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g39640 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10106144g0010 No alias (at3g16720 : 110.0) RING-H2 protein induced after... 0.03 Orthogroups_2024-Update
MA_184439g0010 No alias (at5g17600 : 109.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Mp2g11860.1 No alias RING-H2-class E3 ligase 0.02 Orthogroups_2024-Update
Sobic.002G038733.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc12g087860 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen08g025350 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 105 147
No external refs found!