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  5. Potri.001G173500

Potri.001G173500


Description : periodic tryptophan protein 2


Gene families : OG_42_0004382 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004382_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.001G173500
Cluster HCCA clusters: cluster_0027

Target Alias Description ECC score Gene Family Method Actions
At1g15440 No alias Periodic tryptophan protein 2... 0.05 Orthogroups_2024-Update
Bradi2g19560 No alias periodic tryptophan protein 2 0.07 Orthogroups_2024-Update
Brara.F01061.1 No alias SSU processome assembly factor *(UTP1/PWP2) 0.04 Orthogroups_2024-Update
Brara.H02532.1 No alias SSU processome assembly factor *(UTP1/PWP2) 0.03 Orthogroups_2024-Update
Cre06.g254150 No alias periodic tryptophan protein 2 0.03 Orthogroups_2024-Update
Glyma.09G084600 No alias periodic tryptophan protein 2 0.03 Orthogroups_2024-Update
Glyma.15G193000 No alias periodic tryptophan protein 2 0.06 Orthogroups_2024-Update
LOC_Os05g44320 No alias WD domain, G-beta repeat domain containing protein, expressed 0.05 Orthogroups_2024-Update
Mp1g17900.1 No alias SSU processome assembly factor (UTP1/PWP2) 0.02 Orthogroups_2024-Update
Pp1s87_39V6 No alias T16N11.20; transducin family protein / WD-40 repeat... 0.05 Orthogroups_2024-Update
Seita.3G175900.1 No alias SSU processome assembly factor *(UTP1/PWP2) 0.04 Orthogroups_2024-Update
Sobic.009G201200.1 No alias SSU processome assembly factor *(UTP1/PWP2) 0.05 Orthogroups_2024-Update
Solyc03g120080 No alias WD40 repeat-like protein (AHRD V3.3 *** I0YM64_COCSC) 0.05 Orthogroups_2024-Update
Sopen03g038950 No alias WD domain, G-beta repeat 0.06 Orthogroups_2024-Update
evm.model.contig_3478.9 No alias (at1g15440 : 433.0) periodic tryptophan protein 2... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 379 409
IPR001680 WD40_repeat 416 452
IPR001680 WD40_repeat 501 538
IPR001680 WD40_repeat 94 119
IPR001680 WD40_repeat 552 580
IPR007148 SSU_processome_Utp12 783 888
No external refs found!