Potri.001G188500

Description : GATA transcription factor 9

Gene families : OG_42_0000071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.001G188500
Cluster	HCCA clusters: cluster_0140

Target	Alias	Description	ECC score	Gene Family Method
A4A49_32464	No alias	gata transcription factor 18	0.03	Orthogroups_2024-Update
A4A49_39670	No alias	gata transcription factor 11	0.03	Orthogroups_2024-Update
At3g16870	No alias	Uncharacterized protein At3g16870...	0.03	Orthogroups_2024-Update
At4g36620	No alias	GATA transcription factor 19...	0.05	Orthogroups_2024-Update
At5g26930	No alias	GATA transcription factor 23...	0.03	Orthogroups_2024-Update
Bradi2g62660	No alias	GATA transcription factor 17	0.02	Orthogroups_2024-Update
Bradi4g41570	No alias	GATA transcription factor 9	0.04	Orthogroups_2024-Update
Brara.A00355.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Brara.C03804.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Brara.C03928.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Brara.C04348.1	No alias	transcription factor *(A/B-GATA)	0.04	Orthogroups_2024-Update
Brara.F00491.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Brara.G01891.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
GRMZM2G379005	No alias	GATA transcription factor 12	0.04	Orthogroups_2024-Update
Glyma.02G056600	No alias	GATA type zinc finger transcription factor family protein	0.04	Orthogroups_2024-Update
Glyma.03G232900	No alias	GATA transcription factor 16	0.03	Orthogroups_2024-Update
Glyma.08G187300	No alias	GATA transcription factor 29	0.05	Orthogroups_2024-Update
Glyma.16G139400	No alias	GATA type zinc finger transcription factor family protein	0.04	Orthogroups_2024-Update
LOC_Os11g08410	No alias	GATA zinc finger domain containing protein, expressed	0.02	Orthogroups_2024-Update
PSME_00015866-RA	No alias	(at2g45050 : 154.0) Encodes a member of the GATA factor...	0.03	Orthogroups_2024-Update
Potri.003G174800	No alias	GATA transcription factor 1	0.03	Orthogroups_2024-Update
Potri.003G213300	No alias	GATA transcription factor 29	0.03	Orthogroups_2024-Update
Potri.008G213900	No alias	GATA transcription factor 15	0.03	Orthogroups_2024-Update
Sobic.008G179800.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	116	149

External Links

No external refs found!

Potri.001G188500

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation