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  5. Potri.001G201400

Potri.001G201400


Description : plastid transcriptionally active 17


Gene families : OG_42_0001486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001486_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.001G201400
Cluster HCCA clusters: cluster_0036

Target Alias Description ECC score Gene Family Method Actions
405512 No alias Cobalamin biosynthesis CobW-like protein 0.02 Orthogroups_2024-Update
A4A49_06077 No alias hypothetical protein 0.04 Orthogroups_2024-Update
Bradi3g54350 No alias plastid transcriptionally active 17 0.05 Orthogroups_2024-Update
Brara.B02418.1 No alias cofactor of plastid-encoded RNA polymerase *(TAC17) 0.06 Orthogroups_2024-Update
Cre05.g234652 No alias plastid transcriptionally active 17 0.02 Orthogroups_2024-Update
Cre14.g630871 No alias plastid transcriptionally active 17 0.02 Orthogroups_2024-Update
Glyma.20G240400 No alias plastid transcriptionally active 17 0.05 Orthogroups_2024-Update
HORVU6Hr1G086970.1 No alias cofactor of plastid-encoded RNA polymerase *(TAC17) 0.06 Orthogroups_2024-Update
Pp1s31_130V6 No alias T21F11.27; PRLI-interacting factor L, putative... 0.02 Orthogroups_2024-Update
Seita.1G353900.1 No alias cofactor of plastid-encoded RNA polymerase *(TAC17) 0.05 Orthogroups_2024-Update
Solyc03g117430 No alias COBW domain-containing protein 1 (AHRD V3.3 *** A0A0B2RY32_GLYSO) 0.04 Orthogroups_2024-Update
Sopen03g036320 No alias CobW/HypB/UreG, nucleotide-binding domain 0.03 Orthogroups_2024-Update
evm.model.tig00001110.7 No alias (at1g15730 : 253.0) Cobalamin biosynthesis CobW-like... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003495 CobW/HypB/UreG_dom 91 274
No external refs found!