Potri.001G212700

Description : vacuolar protein sorting 41

Gene families : OG_42_0004060 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004060_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.001G212700
Cluster	HCCA clusters: cluster_0099

Target	Alias	Description	ECC score	Gene Family Method
Brara.F00508.1	No alias	HOPS-specific component *(VPS41/VAM2) of HOPS/CORVET...	0.03	Orthogroups_2024-Update
Kfl00005_0110	kfl00005_0110_v1.1	(at1g08190 : 867.0) Might be involved in protein sorting...	0.02	Orthogroups_2024-Update
Sopen11g026300	No alias	Region in Clathrin and VPS	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	InterProScan predictions
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	InterProScan predictions
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000547	Clathrin_H-chain/VPS_repeat	622	757

External Links

No external refs found!