Potri.001G213700

Description : Argonaute family protein

Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.001G213700
Cluster	HCCA clusters: cluster_0133

Target	Alias	Description	ECC score	Gene Family Method
Glyma.12G083500	No alias	Argonaute family protein	0.02	Orthogroups_2024-Update
LOC_Os03g47820	No alias	PINHEAD, putative, expressed	0.03	Orthogroups_2024-Update
Seita.7G201100.1	No alias	miRNA recruiting factor (AGO) of RNA-induced silencing...	0.03	Orthogroups_2024-Update
evm.model.tig00020961.9	No alias	(at1g48410 : 115.0) Encodes an RNA Slicer that...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003100	PAZ_dom	355	468
IPR032473	Argonaute_Mid_dom	536	614
IPR014811	ArgoL1	288	337
IPR003165	Piwi	632	949
IPR032472	ArgoL2	479	525
IPR032474	Argonaute_N	139	277

External Links

No external refs found!