Potri.001G216100

Description : plant U-box 23

Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.001G216100
Cluster	HCCA clusters: cluster_0167

Target	Alias	Description	ECC score	Gene Family Method
A4A49_34426	No alias	e3 ubiquitin-protein ligase pub24	0.03	Orthogroups_2024-Update
At1g49780	No alias	U-box domain-containing protein 26...	0.03	Orthogroups_2024-Update
At3g18710	No alias	RING-type E3 ubiquitin transferase...	0.03	Orthogroups_2024-Update
Brara.C01808.1	No alias	E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
GRMZM2G168980	No alias	plant U-box 23	0.04	Orthogroups_2024-Update
Glyma.06G154100	No alias	plant U-box 22	0.04	Orthogroups_2024-Update
Glyma.09G172100	No alias	CYS, MET, PRO, and GLY protein 1	0.03	Orthogroups_2024-Update
Glyma.10G081900	No alias	plant U-box 23	0.02	Orthogroups_2024-Update
HORVU4Hr1G064070.1	No alias	E3 ubiquitin ligase	0.04	Orthogroups_2024-Update
LOC_Os02g34410	No alias	U-box domain-containing protein, putative, expressed	0.03	Orthogroups_2024-Update
PSME_00056652-RA	No alias	(at2g35930 : 195.0) Encodes a cytoplasmically localized...	0.03	Orthogroups_2024-Update
PSME_00056761-RA	No alias	(at3g19380 : 247.0) plant U-box 25 (PUB25); FUNCTIONS...	0.03	Orthogroups_2024-Update
Potri.002G070500	No alias	plant U-box 29	0.03	Orthogroups_2024-Update
Potri.009G016200	No alias	plant U-box 23	0.03	Orthogroups_2024-Update
Seita.4G109000.1	No alias	E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
Seita.7G095100.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.003G367000.1	No alias	E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
Sopen01g002990	No alias	U-box domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	InterProScan predictions
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	6	75

External Links

No external refs found!