Potri.001G240900


Description : expansin A4


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.001G240900
Cluster HCCA clusters: cluster_0031

Target Alias Description ECC score Gene Family Method Actions
174522 No alias expansin A8 0.02 Orthogroups_2024-Update
231226 No alias expansin A9 0.03 Orthogroups_2024-Update
409954 No alias expansin A8 0.04 Orthogroups_2024-Update
419575 No alias expansin A16 0.02 Orthogroups_2024-Update
90332 No alias Barwin-like endoglucanases superfamily protein 0.02 Orthogroups_2024-Update
90935 No alias expansin A16 0.02 Orthogroups_2024-Update
91129 No alias expansin A15 0.03 Orthogroups_2024-Update
A4A49_12237 No alias expansin-a15 0.05 Orthogroups_2024-Update
A4A49_26925 No alias expansin-a10 0.04 Orthogroups_2024-Update
A4A49_64370 No alias expansin-a1 0.03 Orthogroups_2024-Update
At5g39280 No alias Expansin-A23 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL79] 0.02 Orthogroups_2024-Update
Bradi2g53580 No alias expansin A8 0.03 Orthogroups_2024-Update
Bradi3g59460 No alias expansin A1 0.02 Orthogroups_2024-Update
Bradi5g04120 No alias expansin 11 0.04 Orthogroups_2024-Update
Brara.C02080.1 No alias alpha-class expansin 0.04 Orthogroups_2024-Update
Brara.E00178.1 No alias alpha-class expansin 0.05 Orthogroups_2024-Update
Brara.F03390.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Brara.G02887.1 No alias alpha-class expansin 0.06 Orthogroups_2024-Update
GRMZM2G073373 No alias expansin 11 0.03 Orthogroups_2024-Update
Glyma.02G235900 No alias expansin A8 0.02 Orthogroups_2024-Update
Glyma.14G203900 No alias expansin A8 0.03 Orthogroups_2024-Update
Glyma.19G024200 No alias expansin A15 0.02 Orthogroups_2024-Update
LOC_Os01g14650 No alias expansin precursor, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os01g60770 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g06000 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g21820 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g39990 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
MA_10425823g0010 No alias (q852a1|expa7_orysa : 372.0) Expansin-A7 precursor... 0.03 Orthogroups_2024-Update
PSME_00011355-RA No alias (at2g40610 : 387.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
PSME_00018428-RA No alias (q40636|expa2_orysa : 402.0) Expansin-A2 precursor... 0.03 Orthogroups_2024-Update
PSME_00025835-RA No alias (at1g26770 : 394.0) Encodes an expansin. Naming... 0.05 Orthogroups_2024-Update
PSME_00029310-RA No alias (at1g26770 : 386.0) Encodes an expansin. Naming... 0.03 Orthogroups_2024-Update
PSME_00050247-RA No alias (at2g40610 : 400.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
PSME_00051759-RA No alias (at2g40610 : 368.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
PSME_00052085-RA No alias (at1g69530 : 372.0) Member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
Potri.004G123200 No alias expansin A1 0.05 Orthogroups_2024-Update
Potri.005G244100 No alias expansin 11 0.05 Orthogroups_2024-Update
Potri.006G108000 No alias expansin A8 0.06 Orthogroups_2024-Update
Potri.013G060800 No alias expansin A15 0.05 Orthogroups_2024-Update
Potri.016G135200 No alias expansin A8 0.04 Orthogroups_2024-Update
Potri.017G140000 No alias expansin A13 0.03 Orthogroups_2024-Update
Potri.019G057500 No alias expansin A8 0.03 Orthogroups_2024-Update
Pp1s11_29V6 No alias expansin 2 0.02 Orthogroups_2024-Update
Pp1s246_53V6 No alias alpha-expansin 1 0.03 Orthogroups_2024-Update
Pp1s251_70V6 No alias alpha-expansin 15 0.02 Orthogroups_2024-Update
Pp1s266_66V6 No alias alpha expansin xpa5 0.03 Orthogroups_2024-Update
Pp1s33_259V6 No alias alpha expansin xpa5 0.02 Orthogroups_2024-Update
Seita.3G204900.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Sobic.001G033300.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Sobic.001G314600.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Sobic.004G238801.1 No alias alpha-class expansin 0.01 Orthogroups_2024-Update
Sobic.007G166500.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Solyc06g049050 No alias expansin 2 0.04 Orthogroups_2024-Update
Sopen03g034870 No alias Pollen allergen 0.03 Orthogroups_2024-Update
Sopen04g035500 No alias Pollen allergen 0.03 Orthogroups_2024-Update
Sopen06g015410 No alias Pollen allergen 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 71 158
IPR007117 Expansin_CBD 169 246
No external refs found!