Potri.001G243400

Description : pumilio 2

Gene families : OG_42_0001049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001049_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.001G243400
Cluster	HCCA clusters: cluster_0105

Target	Alias	Description	ECC score	Gene Family Method
86145	No alias	pumilio 1	0.02	Orthogroups_2024-Update
Brara.D01749.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Cre17.g746647	No alias	pumilio 3	0.01	Orthogroups_2024-Update
Pp1s96_110V6	No alias	pumilio domain-containing protein ppd1	0.02	Orthogroups_2024-Update
evm.model.tig00001065.14	No alias	(at2g29200 : 403.0) Encodes a member of the Arabidopsis...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR012940	NABP	303	729
IPR001313	Pumilio_RNA-bd_rpt	914	939
IPR001313	Pumilio_RNA-bd_rpt	730	756
IPR001313	Pumilio_RNA-bd_rpt	804	832
IPR001313	Pumilio_RNA-bd_rpt	997	1023
IPR001313	Pumilio_RNA-bd_rpt	875	901
IPR001313	Pumilio_RNA-bd_rpt	948	979
IPR001313	Pumilio_RNA-bd_rpt	841	872
IPR001313	Pumilio_RNA-bd_rpt	771	798

External Links

No external refs found!