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  5. Potri.001G265600

Potri.001G265600


Description : carotenoid cleavage dioxygenase 1


Gene families : OG_42_0000424 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000424_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.001G265600
Cluster HCCA clusters: cluster_0177

Target Alias Description ECC score Gene Family Method Actions
A4A49_16982 No alias 9-cis-epoxycarotenoid dioxygenase nced1, chloroplastic 0.03 Orthogroups_2024-Update
At3g24220 No alias 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic... 0.03 Orthogroups_2024-Update
At4g18350 No alias 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic... 0.03 Orthogroups_2024-Update
Brara.A00958.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Brara.C03527.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Brara.E02677.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.04 Orthogroups_2024-Update
LOC_Os12g42280 No alias 9-cis-epoxycarotenoid dioxygenase 1, chloroplast... 0.03 Orthogroups_2024-Update
PSME_00053495-RA No alias (at3g14440 : 677.0) Encodes ... 0.04 Orthogroups_2024-Update
Seita.3G391000.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.02 Orthogroups_2024-Update
Sopen05g032050 No alias Retinal pigment epithelial membrane protein 0.02 Orthogroups_2024-Update
Sopen07g029920 No alias Retinal pigment epithelial membrane protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 57 535
No external refs found!