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  5. Potri.001G265900

Potri.001G265900


Description : carotenoid cleavage dioxygenase 1


Gene families : OG_42_0000424 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000424_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.001G265900
Cluster HCCA clusters: cluster_0010

Target Alias Description ECC score Gene Family Method Actions
272067 No alias carotenoid cleavage dioxygenase 1 0.03 Orthogroups_2024-Update
A4A49_18325 No alias carotenoid 9,10(9',10')-cleavage dioxygenase 1 0.04 Orthogroups_2024-Update
A4A49_34874 No alias putative carotenoid cleavage dioxygenase 4, chloroplastic 0.06 Orthogroups_2024-Update
MA_90573g0010 No alias (at4g19170 : 622.0) chloroplast-targeted member of a... 0.04 Orthogroups_2024-Update
Mp7g12990.1 No alias carotenoid cleavage dioxygenase (CCD1) 0.02 Orthogroups_2024-Update
Pp1s132_26V6 No alias carotenoid cleavage dioxygenase 0.02 Orthogroups_2024-Update
Seita.1G288400.1 No alias carotenoid cleavage dioxygenase *(CCD4) & EC_1.13... 0.04 Orthogroups_2024-Update
Sobic.001G509200.1 No alias carotenoid cleavage dioxygenase *(CCD1) & EC_1.13... 0.03 Orthogroups_2024-Update
Sobic.002G037400.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Sobic.004G268500.1 No alias carotenoid cleavage dioxygenase *(CCD4) & EC_1.13... 0.03 Orthogroups_2024-Update
Solyc01g087260 No alias carotenoid cleavage dioxygenase 1B 0.03 Orthogroups_2024-Update
Solyc07g056570 No alias notabilis 0.02 Orthogroups_2024-Update
Sopen01g034300 No alias Retinal pigment epithelial membrane protein 0.02 Orthogroups_2024-Update
Sopen01g034310 No alias Retinal pigment epithelial membrane protein 0.03 Orthogroups_2024-Update
Sopen08g024140 No alias Retinal pigment epithelial membrane protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 57 535
No external refs found!