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  5. Potri.001G289800

Potri.001G289800


Description : pre-mRNA-processing protein 40A


Gene families : OG_42_0002795 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002795_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.001G289800
Cluster HCCA clusters: cluster_0164

Target Alias Description ECC score Gene Family Method Actions
PSME_00013901-RA No alias (at5g06050 : 196.0) Putative methyltransferase family... 0.02 Orthogroups_2024-Update
Pp1s174_92V6 No alias protein binding 0.02 Orthogroups_2024-Update
Sobic.003G179100.6 No alias pre-mRNA-processing protein *(PRP40A/B) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001202 WW_dom 228 254
IPR001202 WW_dom 269 295
IPR002713 FF_domain 679 734
IPR002713 FF_domain 537 587
IPR002713 FF_domain 470 519
IPR002713 FF_domain 609 654
No external refs found!