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  5. Sopen11g025180

Sopen11g025180


Description : Protein of unknown function, DUF604


Gene families : OG_42_0000161 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000161_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g025180
Cluster HCCA clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
76443 No alias Protein of unknown function (DUF604) 0.03 Orthogroups_2024-Update
GRMZM2G103785 No alias Protein of unknown function (DUF604) 0.03 Orthogroups_2024-Update
PSME_00029841-RA No alias (at5g41460 : 466.0) Protein of unknown function... 0.02 Orthogroups_2024-Update
Pp1s161_117V6 No alias MYC6.16; fringe-related protein [Arabidopsis thaliana] 0.01 Orthogroups_2024-Update
Solyc11g065450 No alias LOW QUALITY:transferring glycosyl group transferase... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025724 GAG-pre-integrase_dom 622 687
IPR001584 Integrase_cat-core 705 816
IPR006740 DUF604 208 459
No external refs found!