Potri.001G298000

Description : pumilio 12

Gene families : OG_42_0001160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001160_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.001G298000
Cluster	HCCA clusters: cluster_0133

Target	Alias	Description	ECC score	Gene Family Method
At1g35750	No alias	Putative pumilio homolog 10...	0.03	Orthogroups_2024-Update
LOC_Os03g09150	No alias	pumilio-family RNA binding repeat domain containing...	0.02	Orthogroups_2024-Update
PSME_00014496-RA	No alias	(at5g56510 : 196.0) Encodes a member of the Arabidopsis...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001313	Pumilio_RNA-bd_rpt	512	543
IPR001313	Pumilio_RNA-bd_rpt	329	361
IPR001313	Pumilio_RNA-bd_rpt	412	437
IPR001313	Pumilio_RNA-bd_rpt	552	575

External Links

No external refs found!