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  5. Sopen11g025440

Sopen11g025440


Description : CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B


Gene families : OG_42_0000352 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000352_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g025440
Cluster HCCA clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
A4A49_36862 No alias nuclear transcription factor y subunit a-1 0.06 Orthogroups_2024-Update
GRMZM2G104396 No alias nuclear factor Y, subunit A7 0.03 Orthogroups_2024-Update
Glyma.18G071000 No alias nuclear factor Y, subunit A1 0.03 Orthogroups_2024-Update
HORVU4Hr1G005670.3 No alias component *(NF-YA) of NF-Y transcription factor complex 0.03 Orthogroups_2024-Update
Potri.006G201900 No alias nuclear factor Y, subunit A10 0.03 Orthogroups_2024-Update
Solyc01g008490 No alias Nuclear transcription factor Y subunit (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update
Sopen12g003980 No alias CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001289 NFYA 169 224
No external refs found!