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  5. Potri.001G347100

Potri.001G347100


Description : DEAD box RNA helicase family protein


Gene families : OG_42_0000814 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000814_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.001G347100
Cluster HCCA clusters: cluster_0016

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G024610.13 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g68320 No alias DEAD-box ATP-dependent RNA helicase 30, putative, expressed 0.04 Orthogroups_2024-Update
Mp3g07940.1 No alias pre-mRNA splicing regulator (DDX5) 0.02 Orthogroups_2024-Update
Sobic.003G050700.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc12g035130 No alias RNA helicase DEAD36 0.03 Orthogroups_2024-Update
Sopen12g013640 No alias DEAD/DEAH box helicase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 189 359
IPR001650 Helicase_C 396 504
No external refs found!