Potri.001G347900

Description : polyribonucleotide nucleotidyltransferase, putative

Gene families : OG_42_0002046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002046_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.001G347900
Cluster	HCCA clusters: cluster_0009

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g48860	No alias	polyribonucleotide nucleotidyltransferase, putative	0.05	Orthogroups_2024-Update
Brara.C00633.1	No alias	phosphorolytic exoribonuclease *(PNP) & EC_2.7...	0.04	Orthogroups_2024-Update
Brara.J02010.1	No alias	phosphorolytic exoribonuclease *(PNP) & EC_2.7...	0.06	Orthogroups_2024-Update
GRMZM2G392798	No alias	polyribonucleotide nucleotidyltransferase, putative	0.02	Orthogroups_2024-Update
Kfl00519_0070	kfl00519_0070_v1.1	(at5g14580 : 753.0) polyribonucleotide...	0.04	Orthogroups_2024-Update
Mp7g12350.1	No alias	polynucleotide phosphorylase (PNP)	0.02	Orthogroups_2024-Update
Pp1s336_43V6	No alias	polyribonucleotide nucleotidyltransferase	0.03	Orthogroups_2024-Update
Seita.1G235700.1	No alias	phosphorolytic exoribonuclease *(PNP) & EC_2.7...	0.06	Orthogroups_2024-Update
Sobic.004G215900.1	No alias	phosphorolytic exoribonuclease *(PNP) & EC_2.7...	0.06	Orthogroups_2024-Update
evm.model.tig00021073.40	No alias	(at5g14580 : 307.0) polyribonucleotide...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	InterProScan predictions
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003029	S1_domain	682	753
IPR015847	ExoRNase_PH_dom2	201	263
IPR015847	ExoRNase_PH_dom2	517	592
IPR015848	PNPase_PH_RNA-bd_bac/org-type	297	376
IPR001247	ExoRNase_PH_dom1	379	512
IPR001247	ExoRNase_PH_dom1	69	198

External Links

No external refs found!