Sopen11g025760


Description : Ankyrin repeats (3 copies)


Gene families : OG_42_0001761 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001761_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g025760
Cluster HCCA clusters: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
Brara.D01729.1 No alias E3 ubiquitin ligase *(XBAT3) 0.03 Orthogroups_2024-Update
GRMZM2G103270 No alias XB3 ortholog 1 in Arabidopsis thaliana 0.03 Orthogroups_2024-Update
GRMZM2G113002 No alias XB3 ortholog 1 in Arabidopsis thaliana 0.03 Orthogroups_2024-Update
Glyma.12G063600 No alias XB3 ortholog 1 in Arabidopsis thaliana 0.02 Orthogroups_2024-Update
Glyma.13G335300 No alias XB3 ortholog 1 in Arabidopsis thaliana 0.03 Orthogroups_2024-Update
HORVU3Hr1G116350.2 No alias E3 ubiquitin ligase *(XBAT3) 0.06 Orthogroups_2024-Update
HORVU4Hr1G059710.8 No alias E3 ubiquitin ligase *(XBAT3) 0.03 Orthogroups_2024-Update
LOC_Os10g32780 No alias RING zinc finger ankyrin protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10426600g0010 No alias (at2g28840 : 507.0) XB3 ortholog 1 in Arabidopsis... 0.03 Orthogroups_2024-Update
Mp7g03250.1 No alias RING-HC-class E3 ligase 0.01 Orthogroups_2024-Update
Potri.009G030000 No alias XB3 ortholog 1 in Arabidopsis thaliana 0.02 Orthogroups_2024-Update
Sobic.003G444900.1 No alias E3 ubiquitin ligase *(XBAT3) 0.03 Orthogroups_2024-Update
Solyc06g076050 No alias Ankyrin repeat family protein (AHRD V3.3 *** B9GJP4_POPTR) 0.03 Orthogroups_2024-Update
Solyc11g066020 No alias Ankyrin repeat family protein (AHRD V3.3 *** B9GJP4_POPTR) 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 110 184
IPR020683 Ankyrin_rpt-contain_dom 15 108
No external refs found!