Potri.001G354400

Description : Pentatricopeptide repeat (PPR) superfamily protein

Gene families : OG_42_0009200 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009200_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.001G354400
Cluster	HCCA clusters: cluster_0158

Target	Alias	Description	ECC score	Gene Family Method	Actions
Glyma.08G123700	No alias	Pentatricopeptide repeat (PPR) superfamily protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032867	DYW_dom	541	665
IPR002885	Pentatricopeptide_repeat	166	213
IPR002885	Pentatricopeptide_repeat	266	314
IPR002885	Pentatricopeptide_repeat	73	105
IPR002885	Pentatricopeptide_repeat	367	415
IPR002885	Pentatricopeptide_repeat	443	467
IPR002885	Pentatricopeptide_repeat	46	72
IPR002885	Pentatricopeptide_repeat	138	165
IPR002885	Pentatricopeptide_repeat	106	135

External Links

No external refs found!