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  5. Potri.001G359200

Potri.001G359200


Description : Alpha amylase family protein


Gene families : OG_42_0001294 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001294_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.001G359200
Cluster HCCA clusters: cluster_0138

Target Alias Description ECC score Gene Family Method Actions
Bradi3g44760 No alias starch branching enzyme 2.2 0.02 Orthogroups_2024-Update
Pp1s200_23V6 No alias starch branching enzyme ii 0.03 Orthogroups_2024-Update
Seita.4G152500.1 No alias starch branching enzyme & EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Solyc07g064830 No alias Starch branching enzyme III (AHRD V3.3 *** I0B8P4_WHEAT) 0.03 Orthogroups_2024-Update
evm.model.contig_2064.4 No alias (at2g36390 : 732.0) Encodes a starch branching enzyme... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
MF GO:0043169 cation binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006048 A-amylase/branching_C 827 920
IPR006047 Glyco_hydro_13_cat_dom 452 591
IPR004193 Glyco_hydro_13_N 146 208
No external refs found!