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  5. Potri.001G375400

Potri.001G375400


Description : sodium/calcium exchanger family protein / calcium-binding EF hand family protein


Gene families : OG_42_0001514 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001514_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.001G375400
Cluster HCCA clusters: cluster_0128

Target Alias Description ECC score Gene Family Method Actions
HORVU7Hr1G037600.1 No alias cation exchanger *(NCL/EF-CAX) 0.02 Orthogroups_2024-Update
MA_10428416g0010 No alias (at1g53210 : 127.0) sodium/calcium exchanger family... 0.02 Orthogroups_2024-Update
Mp1g03300.1 No alias cation exchanger (NCL/EF-CAX) 0.02 Orthogroups_2024-Update
PSME_00012646-RA No alias (at1g53210 : 404.0) sodium/calcium exchanger family... 0.02 Orthogroups_2024-Update
evm.model.tig00000480.66 No alias (at1g53210 : 124.0) sodium/calcium exchanger family... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 442 504
IPR002048 EF_hand_dom 303 367
IPR004837 NaCa_Exmemb 560 703
No external refs found!