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  5. Potri.001G377700

Potri.001G377700


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000512 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000512_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.001G377700
Cluster HCCA clusters: cluster_0121

Target Alias Description ECC score Gene Family Method Actions
A4A49_10908 No alias polygalacturonase 0.04 Orthogroups_2024-Update
A4A49_25931 No alias polygalacturonase 0.03 Orthogroups_2024-Update
At3g07840 No alias Pectin lyase-like superfamily protein... 0.04 Orthogroups_2024-Update
At4g18180 No alias Pectin lyase-like superfamily protein [Source:TAIR;Acc:AT4G18180] 0.03 Orthogroups_2024-Update
Brara.D02006.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Glyma.04G157600 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G038100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G169100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.4G217900.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Solyc07g056290 No alias Pectin lyase-like superfamily protein (AHRD V3.3 *** AT1G78400.1) 0.02 Orthogroups_2024-Update
Sopen07g023430 No alias Glycosyl hydrolases family 28 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 59 384
No external refs found!