Potri.001G384000

Description : light-regulated zinc finger protein 1

Gene families : OG_42_0002427 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002427_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.001G384000
Cluster	HCCA clusters: cluster_0009

Target	Alias	Description	ECC score	Gene Family Method
At1g78600	No alias	Light-regulated zinc finger protein 1...	0.03	Orthogroups_2024-Update
Bradi4g40250	No alias	light-regulated zinc finger protein 1	0.01	Orthogroups_2024-Update
HORVU7Hr1G023060.1	No alias	BBX class-IV transcription factor	0.02	Orthogroups_2024-Update
Seita.4G072000.1	No alias	BBX class-IV transcription factor	0.04	Orthogroups_2024-Update
Seita.5G143400.1	No alias	BBX class-IV transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G026700.1	No alias	BBX class-IV transcription factor	0.04	Orthogroups_2024-Update
Sobic.008G073400.1	No alias	BBX class-IV transcription factor	0.04	Orthogroups_2024-Update
Sobic.010G041700.1	No alias	BBX class-IV transcription factor	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000315	Znf_B-box	54	90

External Links

No external refs found!