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  5. Sopen11g026100

Sopen11g026100


Description : Shugoshin C terminus


Gene families : OG_42_0003509 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003509_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g026100
Cluster HCCA clusters: Cluster_408

Target Alias Description ECC score Gene Family Method Actions
Brara.A03485.1 No alias centromeric cohesion protection factor *(SGO) 0.03 Orthogroups_2024-Update
Glyma.10G196400 No alias Shugoshin C terminus 0.05 Orthogroups_2024-Update
Glyma.11G193300 No alias Shugoshin C terminus 0.02 Orthogroups_2024-Update
Glyma.12G080700 No alias Shugoshin C terminus 0.06 Orthogroups_2024-Update
Potri.004G216000 No alias Shugoshin C terminus 0.03 Orthogroups_2024-Update
Solyc11g066350 No alias Shugoshin-1, putative (AHRD V3.3 *** B9SCJ5_RICCO) 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0045132 meiotic chromosome segregation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011515 Shugoshin_C 270 294
No external refs found!