Potri.001G394200

Description : plastid transcriptionally active 9

Gene families : OG_42_0002038 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002038_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.001G394200
Cluster	HCCA clusters: cluster_0041

Target	Alias	Description	ECC score	Gene Family Method
At1g31010	No alias	Protein OSB4, chloroplastic...	0.02	Orthogroups_2024-Update
Bradi2g60720	No alias	plastid transcriptionally active 9	0.04	Orthogroups_2024-Update
GRMZM2G128432	No alias	Primosome PriB/single-strand DNA-binding	0.02	Orthogroups_2024-Update
HORVU3Hr1G107020.3	No alias	cofactor of plastid-encoded RNA polymerase *(TAC9) &...	0.04	Orthogroups_2024-Update
LOC_Os03g43420	No alias	single-stranded DNA-binding protein, putative, expressed	0.02	Orthogroups_2024-Update
Seita.5G451200.1	No alias	cofactor of plastid-encoded RNA polymerase *(TAC9) &...	0.05	Orthogroups_2024-Update
Sobic.001G161400.1	No alias	ssDNA-binding protein *(OSB)	0.03	Orthogroups_2024-Update
Solyc09g007430	No alias	Single-stranded DNA binding protein (AHRD V3.3 *** D7KGI0_ARALL)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003697	single-stranded DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000424	Primosome_PriB/ssb	117	179

External Links

No external refs found!