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  5. Potri.001G404800

Potri.001G404800


Description : LRR and NB-ARC domains-containing disease resistance protein


Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.001G404800
Cluster HCCA clusters: cluster_0175

Target Alias Description ECC score Gene Family Method Actions
Brara.A01692.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.F01102.1 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00021517-RA No alias (at1g12210 : 150.0) RFL1 has high sequence similarity to... 0.03 Orthogroups_2024-Update
PSME_00033120-RA No alias (at1g63350 : 267.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00034448-RA No alias (at1g12220 : 195.0) Resistance gene, mediates resistance... 0.03 Orthogroups_2024-Update
PSME_00037099-RA No alias (at4g26090 : 230.0) Encodes a plasma membrane protein... 0.02 Orthogroups_2024-Update
Potri.T013566 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Solyc08g007250 No alias Disease resistance protein (AHRD V3.3 *** W9RZV6_9ROSA) 0.03 Orthogroups_2024-Update
Sopen08g004810 No alias NB-ARC domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002182 NB-ARC 228 464
IPR001611 Leu-rich_rpt 604 663
IPR001611 Leu-rich_rpt 675 729
IPR003656 Znf_BED 15 52
No external refs found!